Information for 9-RMTTAAGGYMTKR (Motif 11)

T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
Reverse Opposite:
A G T C G T C A C G T A A C T G T C A G A G T C A G T C A C G T A G C T C G T A C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.813
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.4 +/- 15.3bp
Average Position of motif in Background45.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:RMTTAAGGYMTKR
-----AGGCCTNG
 T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PH0088.1_Isl2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RMTTAAGGYMTKR--
AAATTAATTGATTTNG
 A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

Nkx2-5/MA0063.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RMTTAAGGYMTKR
CAATTAA-------
 A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------RMTTAAGGYMTKR
ACAAGCAATTAAAGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------RMTTAAGGYMTKR
ACAAGCAATTAAAGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:RMTTAAGGYMTKR
-----AGGCCTAG
 T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Hmx3/MA0898.1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------RMTTAAGGYMTKR
ACAAGCAATTAAAGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------RMTTAAGGYMTKR
ACAAGCAATTAAAGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RMTTAAGGYMTKR
GTAATTAA-------
 A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------RMTTAAGGYMTKR
ACAAGCAATTAATGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C C G A T A C G T C T G A C G T A A C T G A C T G A G T C G T A C A C G T A C G T C T A G
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T A C G T A C G T