Information for 8-TGAGCTTTTTATA (Motif 10)

A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
Reverse Opposite:
C G A T G T C A A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 20.5bp
Average Position of motif in Background30.3 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTTTTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTTTTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAGCTTTTTATA
TGACCTTTNCNT-
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGAGCTTTTTATA--
---GCTATTTATAGC
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGAGCTTTTTATA--
---TCTATTTATAGN
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTTTTATA
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTTTTATA
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAGCTTTTTATA
TGACCTTGAT---
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGCTTTTTATA
--AGCTCATTAT-
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAGCTTTTTATA--
---TCTATTTTTAGA
 A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T A C G T A C G T C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A