Information for 1-WRGGTCAVKSTGACCT (Motif 1)

G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T
Reverse Opposite:
C T G A C A T G C A T G C G A T T A G C C G T A A T G C G T A C A C G T C G A T C T A G G C T A G A T C G T A C A G T C C G A T
p-value:1e-35
log p-value:-8.069e+01
Information Content per bp:1.609
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif7.74%
Number of Background Sequences with motif161.1
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets39.8 +/- 22.3bp
Average Position of motif in Background50.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT
-AGGNCANNGTGACCT
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT-
--GGTCANNGTGACCTN
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:WRGGTCAVKSTGACCT-
AAGGTCACGGTGACCTG
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--WRGGTCAVKSTGACCT--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.71
Offset:10
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT--
----------TGACCTYA
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.69
Offset:10
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT
----------TGACCT
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT-
---------GTGACCTT
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WRGGTCAVKSTGACCT-
-AGNACAGNCTGTTCTN
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.68
Offset:10
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT----
----------TGACCTTGAT
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.67
Offset:10
Orientation:reverse strand
Alignment:WRGGTCAVKSTGACCT--
----------TGACCYCT
 G C A T T C A G C A T G C T A G C G A T A G T C C G T A T G A C A C T G A T C G A C G T A T C G G C T A G A T C G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T