Information for 4-AAAGAGAGTGAGT (Motif 9)

C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C A C G T A G T C C T G A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.3 +/- 7.4bp
Average Position of motif in Background33.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGAGAGTGAGT-
AAAAAGCGGAAGTA
 C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAGAGTGAGT
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAAGAGAGTGAGT
TTGACCGAGAATTCC-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGAGTGAGT
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

SPIC/MA0687.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAGAGAGTGAGT-
AAAAAGAGGAAGTA
 C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AAAGAGAGTGAGT------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAGAGTGAGT
AGAAACGAAAGT----
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAGAGTGAGT
GAAAGTGAAAGT--
 A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAAGAGAGTGAGT
---GAGSCCGAGC
 C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------AAAGAGAGTGAGT
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A G C T A C T G C G T A A C T G C G A T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T