Information for 2-TAAGGTAAAT (Motif 6)

A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T
Reverse Opposite:
C G T A A G C T A C G T A C G T G T C A A G T C A G T C A G C T C A G T C G T A
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.846
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif203.9
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets49.7 +/- 27.5bp
Average Position of motif in Background51.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAAGGTAAAT--
-CAGGTAAGTAT
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAAGGTAAAT
TRAGGTCA--
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAAGGTAAAT-
-WAAGTAAAYA
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAAGGTAAAT--
-TATGTAAATAT
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T A C G T
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAAGGTAAAT--
-TATGTAAATAT
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T A C G T
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAAGGTAAAT
-AAGGTCAC-
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAAGGTAAAT-
-AAAGTAAACA
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGTAAAT-----
NTNAGGTAATTACCTT
 A C G T A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAAGGTAAAT
--AGGTCA--
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAGGTAAAT
NATGGAAAAN
 A C G T G T C A C T G A A C T G C T A G C A G T G T C A C G T A C T G A C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T