Information for 1-ACCTAGATTA (Motif 2)

G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A
Reverse Opposite:
A C G T C G T A G T C A A C G T A G T C A C G T C G T A A T C G A C T G A C G T
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif36.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets38.0 +/- 20.7bp
Average Position of motif in Background49.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACCTAGATTA--
TTGCCCGGATTAGG
 A C G T A C G T G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ACCTAGATTA-
---RGGATTAR
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACCTAGATTA--
----GGATTAGC
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCTAGATTA-
---NGGATTAA
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCTAGATTA-
---GGGATTAA
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAGATTA--
GNNACCGAGAATNNN
 A C G T A C G T A C G T G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCTAGATTA--
--VRGGATTARN
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAGATTA-
TTGACCTANTTATN
 A C G T A C G T A C G T G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACCTAGATTA-
---CGGATTAN
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACCTAGATTA--
---GGGATTANN
 G T C A A G T C T A G C A C G T C G T A A C T G C G T A C A G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G