Information for 4-GAATTCATGA (Motif 10)

C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C G T C A C G A T A C T G C G T A G T C A A C G T A C G T A G T C
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif129.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets52.4 +/- 24.3bp
Average Position of motif in Background47.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GAATTCATGA----
ACATTCATGACACG
 C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GAATTCATGA-
GGACTGAATTCATGCC
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAATTCATGA----
AGTTATTAATGAGGTC
 A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAATTCATGA
-AATTAGTG-
 C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GAATTCATGA--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PH0149.1_Pou3f4/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAATTCATGA----
AATTAATTAATTAATTC
 A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAATTCATGA---
AATCAATTCAATAATT
 A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAATTCATGA----
GATTAATTAATTAAGTC
 A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0146.1_Pou3f1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAATTCATGA----
AATTAATTAATTAATTC
 A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAATTCATGA---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G A T G T A C C G T A A C G T A C T G G T C A A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T