Information for 8-CTKRGMRAATCCT (Motif 8)

A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G C G T A A C G T A C G T A G T C A C G T A G T C A G T C G T C A C T G A C T A G
p-value:1e-13
log p-value:-3.099e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 25.7bp
Average Position of motif in Background26.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTKRGMRAATCCT-
----NYTAATCCYB
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTKRGMRAATCCT
----GCTAATCC-
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTKRGMRAATCCT-----
--GATAACATCCTAGTAG
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTKRGMRAATCCT---
GNNAGCTAATCCCCCN
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTKRGMRAATCCT-
------TAATCCCN
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTKRGMRAATCCT
-----TTAATCCT
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTKRGMRAATCCT-----
--AGGCTAATCCCCAANG
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTKRGMRAATCCT
-----YTAATCCY
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTKRGMRAATCCT
----CTTAATCCC
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTKRGMRAATCCT-
----GCTAATCCCC
 A G T C A G C T A C G T C T A G A C T G G T C A C T A G C G T A C G T A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C