Information for 18-TGATHATTATCAB (Motif 23)

A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
T A C G A C G T A C T G C G T A A C G T T G C A C G T A A C G T C A G T C G T A A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 26.2bp
Average Position of motif in Background59.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGATHATTATCAB
NNAGATNVNWATCTN
 A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGATHATTATCAB
TAGTGATCATCATTA-
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T

EVX1/MA0887.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGATHATTATCAB
-GGTAATTAGC--
 A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGATHATTATCAB-
NNTAATTATAATNANN
 A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

EVX2/MA0888.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGATHATTATCAB
-GGTAATTAGC--
 A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATHATTATCAB-
GCTAATTATAATTATC
 A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGATHATTATCAB-
AGATTCTTATCTGT
 A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

Hoxb5/MA0904.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGATHATTATCAB
ATGNGCTAATTANCNT
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGATHATTATCAB
ATGNGCTAATTANCNT
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGATHATTATCAB-
TATAATTATAATATTC
 A C G T A C G T A C G T A C T G C G T A A C G T G C T A C G T A A C G T A C G T C G T A A C G T A G T C C G T A A G T C A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C