Information for 8-ACATGCCCTA (Motif 10)

C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
Reverse Opposite:
G C A T T C G A C A T G C T A G A C T G T G A C G T C A G A C T C A T G G C A T
p-value:1e-11
log p-value:-2.739e+01
Information Content per bp:1.660
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif603.4
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets50.8 +/- 26.6bp
Average Position of motif in Background52.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACATGCCCTA----
GGGTGTGCCCAAAAGG
 A C G T A C G T C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACATGCCCTA-
--ATGCCCACC
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGCCCTA
ACATTCCA--
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACATGCCCTA
CACATTCCAT-
 A C G T C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCCCTA
NNACTTGCCTT-
 A C G T A C G T C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTA---
---TGACCTARTT
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTA-
---TGACCTYA
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTA
---TGACCT-
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACATGCCCTA
CACATTCCAT-
 A C G T C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACATGCCCTA
RCATTCCWGG
 C G T A G T A C C T G A C A G T A C T G T G A C G A T C G T A C A G C T C G T A
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G