Information for 1-WVRRTAAACA (Motif 1)

G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
Reverse Opposite:
A C G T T C A G G A C T A C G T A C G T C T G A G A T C G A T C A G C T C G T A
p-value:1e-47
log p-value:-1.104e+02
Information Content per bp:1.607
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif29.26%
Number of Background Sequences with motif5145.8
Percentage of Background Sequences with motif10.70%
Average Position of motif in Targets49.8 +/- 26.9bp
Average Position of motif in Background49.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP3/MA0850.1/Jaspar

Match Rank:1
Score:0.91
Offset:3
Orientation:forward strand
Alignment:WVRRTAAACA
---GTAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A

FOXL1/MA0033.2/Jaspar

Match Rank:2
Score:0.91
Offset:3
Orientation:forward strand
Alignment:WVRRTAAACA
---GTAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:WVRRTAAACA
-AAATAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:WVRRTAAACA
WAAGTAAAYA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXD2/MA0847.1/Jaspar

Match Rank:5
Score:0.90
Offset:3
Orientation:forward strand
Alignment:WVRRTAAACA
---GTAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:WVRRTAAACA
AAAGTAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:WVRRTAAACA
AAAGTAAACA
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-WVRRTAAACA-
WWATRTAAACAN
 A C G T G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.88
Offset:0
Orientation:forward strand
Alignment:WVRRTAAACA--
WWTRTAAACAVG
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:10
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:WVRRTAAACA---
---GTAAACAWBN
 G C A T T C G A C T A G C T A G A G C T C G T A G T C A C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A