Information for 2-GGGCARGGTGACC (Motif 2)

A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
Reverse Opposite:
C T A G A C T G C G A T A T G C G T C A A G T C G A T C A G T C A C G T A C T G T G A C G T A C G T A C
p-value:1e-31
log p-value:-7.267e+01
Information Content per bp:1.712
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif103.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets54.1 +/- 25.2bp
Average Position of motif in Background48.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGCARGGTGACC--
GGTCANNGTGACCTN
 A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGGCARGGTGACC-
AGGNCANNGTGACCT
 A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GGGCARGGTGACC--
AAGGTCACGGTGACCTG
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGGCARGGTGACC----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGCARGGTGACC
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGCARGGTGACC
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGCARGGTGACC
--TCAAGGTCAN-
 A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCARGGTGACC
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCARGGTGACC
-BTCAAGGTCA--
 A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGCARGGTGACC
NGTGGGCAT-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A T C A G C T A G T A C G A C G T T A C G C G T A G T A C G A T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T