Information for 5-GTTGACCTGA (Motif 7)

C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
Reverse Opposite:
G A C T T G A C C G T A C T A G C T A G C A G T G T A C C G T A G C T A G A T C
p-value:1e-17
log p-value:-3.985e+01
Information Content per bp:1.683
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif1190.4
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets48.3 +/- 30.3bp
Average Position of motif in Background50.3 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GTTGACCTGA
--TGACCTYA
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GTTGACCTGA
--TGACCT--
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTGACCTGA
-GTGACCTT-
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTTGACCTGA--
--TGACCTTGAT
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTGACCTGA-
CNNTTGACCTTTG
 A C G T A C G T C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTTGACCTGA-
-NTGACCTTGA
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTGACCTGA
--TGACCYCT
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTGACCTGA-
-ATGACCTTGA
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTGACCTGA
-TTGACTTTT
 C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTGACCTGA----
NNNGTGACCTTTGNNN
 A C G T A C G T C T A G C G A T A C G T C A T G G T C A G A T C G A T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A