Information for 23-TCAAATATTGACC (Motif 23)

A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
Reverse Opposite:
C T A G T A C G A C G T G A T C C G T A C T G A C A G T C G T A A C G T A C G T A C G T C T A G C G T A
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.3 +/- 21.2bp
Average Position of motif in Background67.5 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCAAATATTGACC--
-CTAATATTGCTAAA
 A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCAAATATTGACC--
-CTAATATTGCTAAA
 A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCAAATATTGACC
GGTTAAACATTAA--
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTGACC
NATTCAAAT-------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCAAATATTGACC
TTAATNATTAAC-
 A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTGACC
GTTAATNATTAAC-
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAAATATTGACC
AGTTAATGATTAACT
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAAATATTGACC
CGGTTTCAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAAATATTGACC
ATTAAA--------
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATATTGACC--
TTGACCTTTTGACCTT
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T G C T A A G C T A C G T C T A G T C G A A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T