Information for 2-TTATATAAAMTAT (Motif 9)

A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A G C T A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.151e+01
Information Content per bp:1.835
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.0 +/- 17.5bp
Average Position of motif in Background51.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTATATAAAMTAT
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATATAAAMTAT
ANGTTACATAA-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTATATAAAMTAT
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0101.1_Lmx1b/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTATATAAAMTAT
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATATAAAMTAT
RTTATGYAAB----
 A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATATAAAMTAT
CATTACGTAACC---
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTATATAAAMTAT
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

DBP/MA0639.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTATATAAAMTAT
TATTACGTAACA---
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
A C G T T C G A G C A T A C G T C T G A A G T C T C A G A G C T T G C A C G T A A G T C T C G A A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTATATAAAMTAT
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTATATAAAMTAT
GAAATTAATTAAATAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A G T C A C T G A G T C A A C G T G T C A A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T