Information for 7-GACAKTTGSC (Motif 9)

A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
Reverse Opposite:
A T C G A T G C G T A C C G T A G C T A G T C A G C A T A C T G A C G T A T G C
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.661
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif10.92%
Number of Background Sequences with motif2385.9
Percentage of Background Sequences with motif4.98%
Average Position of motif in Targets50.3 +/- 25.6bp
Average Position of motif in Background49.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GACAKTTGSC
TGGCAGTTGG-
 A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACAKTTGSC
TGGCAGTTGN-
 A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GACAKTTGSC--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GACAKTTGSC--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAKTTGSC
TTGACAG-----
 A C G T A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACAKTTGSC-
TGACCTTTNCNT
 A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAKTTGSC
GGCVGTTR--
 A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GACAKTTGSC
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACAKTTGSC
BRRCVGTTDN-
 A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACAKTTGSC
TTGACTTTT---
 A C G T A C G T A T C G G T C A G T A C C G T A C A G T C G A T C G A T C A T G A T C G T A G C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T