Information for 6-ATGTMTTCAGTCA (Motif 5)

C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A T G C A C G T A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.5 +/- 21.0bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:ATGTMTTCAGTCA
------TGAGTCA
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGTMTTCAGTCA
-RGCCATYAATCA
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATGTMTTCAGTCA--
---CCATCAATCAAA
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGTMTTCAGTCA-
--GYCATCMATCAT
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGTMTTCAGTCA
--GAAATGACTCA
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A
A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGTMTTCAGTCA
---TCATCAATCA
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGTMTTCAGTCA----
-NNCATTCATTCATNNN
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATGTMTTCAGTCA--
-----ATGASTCATH
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATGTMTTCAGTCA--
-----ATGASTCATY
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGTMTTCAGTCA--
---NNATGASTCATH
 C G T A C G A T A C T G C G A T G T A C C G A T A C G T A G T C C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C