Information for 11-TTADGCATGACCT (Motif 11)

A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T
Reverse Opposite:
C G T A C A T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C G A C T C G A T C G T A C T G A
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 31.2bp
Average Position of motif in Background42.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTADGCATGACCT
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:TTADGCATGACCT--
-------TGACCTYA
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TTADGCATGACCT
-------TGACCT
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TTADGCATGACCT----
-------TGACCTTGAT
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TTADGCATGACCT---
------ATGACCTTGA
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTADGCATGACCT
TTCACGCATGAGTT
 A C G T A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTADGCATGACCT------
--NNNNATGACCTTGANTN
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TTADGCATGACCT--
-------TGACCYCT
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTADGCATGACCT
-----CATGAC--
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTADGCATGACCT------
---NNNNTGACCTTTNNNN
 A G C T A C G T C G T A C G T A T A C G T A G C C G T A A C G T C T A G C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A