Information for 4-CCCGAGGGCA (Motif 3)

A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
Reverse Opposite:
C G A T A T C G T A G C T G A C A G T C A G C T T A G C C T A G T C A G T C A G
p-value:1e-23
log p-value:-5.490e+01
Information Content per bp:1.665
Number of Target Sequences with motif143.0
Percentage of Target Sequences with motif18.43%
Number of Background Sequences with motif3502.6
Percentage of Background Sequences with motif7.26%
Average Position of motif in Targets51.2 +/- 27.9bp
Average Position of motif in Background50.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGGCA-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCCGAGGGCA-
GCCTCAGGGCAT
 A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGGCA
TGCCCCAGGGCA
 A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGGCA
TGCCCCAGGGCA
 A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCCGAGGGCA-
SCCTSAGGSCAW
 A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGGCA
TGCCCCCGGGCA
 A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGGCA-
TCACCTCTGGGCAG
 A C G T A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CCCGAGGGCA
TGCCCNNAGGGCA
 A C G T A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCCGAGGGCA
TGCCCTNAGGGCA
 A C G T A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGGCA
TGCCCTGAGGGCA
 A C G T A C G T A C G T A G T C A G T C G A T C A T C G T C G A T C A G A C T G A T C G T A G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A