Information for 1-TRTTTAYHTW (Motif 2)

A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
Reverse Opposite:
G C T A T C G A C A T G C T A G G A C T G T C A C G T A C G T A A G T C C G T A
p-value:1e-44
log p-value:-1.027e+02
Information Content per bp:1.668
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif22.29%
Number of Background Sequences with motif3186.8
Percentage of Background Sequences with motif6.60%
Average Position of motif in Targets50.3 +/- 26.4bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TRTTTAYHTW
TRTTTACTTW
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TRTTTAYHTW
TGTTTATTT-
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TRTTTAYHTW
TGTTTACTTT
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TRTTTAYHTW
TGTTTACTTT
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TRTTTAYHTW
TTTGTTTACTTA
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTAYHTW
ATATTTACATA
 A C G T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TRTTTAYHTW
TGTTTAC---
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TRTTTAYHTW
TGTTTAC---
 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---TRTTTAYHTW--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TRTTTAYHTW-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G T A C A G C T C G A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G