Information for 10-CAGGGCACCGCCC (Motif 10)

G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C
Reverse Opposite:
C A T G A C T G A T C G G T A C C T A G A T C G A C G T A T C G G T A C A G T C G T A C A C G T A C T G
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.775
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif110.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.6 +/- 27.8bp
Average Position of motif in Background50.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CAGGGCACCGCCC--
---GGCCCCGCCCCC
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGGGCACCGCCC--
---GGCCACRCCCMK
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CAGGGCACCGCCC
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCACCGCCC
WDNCTGGGCA------
 A C G T A C G T A C G T G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CAGGGCACCGCCC---
----GCTCCGCCCMCY
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGGGCACCGCCC----
--NRGCCCCRCCCHBNN
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGGGCACCGCCC---
--NAGCCCCGCCCCCN
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGGGCACCGCCC--
-AGGTCANTGACCTN
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T A C G T
A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAGGGCACCGCCC-
----GCCCCGCCCC
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAGGGCACCGCCC-
----GCCCCACCCA
 G T A C G T C A A C T G A C T G A C T G A T G C G T C A A T G C G A T C C A T G A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A