Information for 10-AAAGGTCATA (Motif 13)

C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
Reverse Opposite:
A C G T C T G A A C G T A T C G G T C A A G T C G T A C C G A T A C G T A G C T
p-value:1e-12
log p-value:-2.924e+01
Information Content per bp:1.820
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif188.2
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets53.8 +/- 27.0bp
Average Position of motif in Background48.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTCATA
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATA--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATA--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATA
TCAAGGTCAT-
 A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATA--
CAAAGGTCAAGGG
 A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCATA---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATA
TCAAGGTCATA
 A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGTCATA
TCAAGGTCAN-
 A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCATA
CAAAGGTCAG-
 A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAAGGTCATA
TTCAAGGTCAT-
 A C G T A C G T C T G A G T C A C G T A A C T G C T A G A C G T A T G C G T C A A G C T G T C A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T