Information for 3-TTAATTCTAT (Motif 7)

A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
Reverse Opposite:
T C G A G A C T C G T A C A T G G T C A C G T A C G A T C G A T C G T A G T C A
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.831
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.76%
Number of Background Sequences with motif411.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets38.1 +/- 23.8bp
Average Position of motif in Background48.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTAATTCTAT
ATATTAATTAA--
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTAATTCTAT
TTAATTAN--
 A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTAATTCTAT----
AATCAATTCAATAATT
 A C G T A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTAATTCTAT
NTAATTAN--
 A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTCTAT
NNTAATTAGA-
 A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTCTAT
TTTAAT-----
 A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCTAT---
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTAATTCTAT
TTAATTAN--
 A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTAATTCTAT
AATTAATTAGT-
 A C G T A C G T A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTAATTCTAT---
-TAATTNVATTAN
 A C G T C G A T C G T A C G T A A C G T A C G T G T A C C G A T C T G A A G C T A C G T A C G T A C G T
A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G