Information for 2-TGTCTGGAACAGC (Motif 5)

A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
Reverse Opposite:
T C A G A T G C A C G T A C T G C G A T C G A T A T G C G T A C G C T A A C T G C G T A A G T C C T G A
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.739
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif42.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets59.3 +/- 32.2bp
Average Position of motif in Background51.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGTCTGGAACAGC
--CCAGGAACAG-
 A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TGTCTGGAACAGC-
----TGGAACAGMA
 A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGGAACAGC
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTCTGGAACAGC
GGTCTGGCAT---
 A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGGAACAGC-
NGNTCTAGAACCNGV
 A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGGAACAGC
CTGTCTGG------
 A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTGGAACAGC--
NNGATCTAGAACCTNNN
 A C G T A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGGAACAGC
VBSYGTCTGG------
 A C G T A C G T A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTCTGGAACAGC
ANTTCTCAGGAANNN-
 A C G T A C G T A C G T A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGTCTGGAACAGC
----TGGAAAA--
 A G C T T A C G C G A T A G T C C A G T A C T G A T C G C G T A C G T A A G T C G T C A A T C G A G T C
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T