Information for 2-CAGAGCTGATNRC (Motif 6)

G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
Reverse Opposite:
A T C G G A T C T C G A G T C A A C G T A T G C C G T A A C T G A G T C A C G T A G T C C G A T A C T G
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.741
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif128.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets47.5 +/- 28.3bp
Average Position of motif in Background50.8 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGAGCTGATNRC
--CAGCC------
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGAGCTGATNRC
AACAGCTGAT---
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGAGCTGATNRC
CGGAGC-------
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGAGCTGATNRC
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PH0058.1_Hoxb3/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGAGCTGATNRC-----
-TGAGCTAATTAGTTGGA
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGAGCTGATNRC---
CTGAGCTAATTACCGT
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGAGCTGATNRC
-HCAGCTGDTN--
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGCTGATNRC-----
NDBAGATRWTATCTVNNNNN
 A C G T A C G T G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGAGCTGATNRC
AACAGCTG-----
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGAGCTGATNRC----
CAAAGCTAATTAGNTTN
 G T A C C G T A A C T G C G T A A C T G A G T C G C A T T A C G C G T A A C G T A G C T C T A G A T G C A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A