Information for 4-AGATGTGCATCTGCAC (Motif 5)

C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
Reverse Opposite:
A T C G A C G T A T C G G A T C C G T A A C T G C T G A A C G T A C T G A G T C G T C A G T A C T C G A G A C T A T G C A G C T
p-value:1e-13
log p-value:-3.051e+01
Information Content per bp:1.715
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.2 +/- 26.6bp
Average Position of motif in Background58.2 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGATGTGCATCTGCAC
--ATTTGCATAT----
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGATGTGCATCTGCAC
--ATTTGCATAA----
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGATGTGCATCTGCAC
TTCATTTGCATAT----
 A C G T C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGATGTGCATCTGCAC
----ATGMATATDC--
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGATGTGCATCTGCAC
-NGTGGGCAT------
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGATGTGCATCTGCAC
AAAATATGCATAATAAA
 A C G T C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGATGTGCATCTGCAC-
--AYATGYATATGCATR
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C A C G T
A C G T A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGATGTGCATCTGCAC
----SNGCACCTGCHS
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGATGTGCATCTGCAC
NNAGATNVNWATCTN---
 A C G T A C G T C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGATGTGCATCTGCAC
----GCGCATGCGCAC
 C T G A A T C G C T G A A C G T C A T G A C G T A C T G G T A C C G T A A G C T T G A C G C A T C A T G A T G C C G T A A T G C
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C