Information for 22-CAGGTGCACCTGG (Motif 42)

A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
Reverse Opposite:
T A G C A G T C C G T A C T A G A T C G C G A T A T C G T G A C T G C A A T G C A G T C G C A T A C T G
p-value:1e-6
log p-value:-1.602e+01
Information Content per bp:1.679
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif506.1
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets56.2 +/- 23.0bp
Average Position of motif in Background51.5 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGGTGCACCTGG-
----CGCACCTGCT
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGGTGCACCTGG-
----TACACCTGTC
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGCACCTGG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCACCTGG
SDGCAGGTGCNS----
 A C G T A C G T A C G T A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCACCTGG
NNCAGGTGTN-----
 A C G T A C G T A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAGGTGCACCTGG-
----NNCACCTGNN
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCACCTGG
AACAGGTGT------
 A C G T A C G T A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGGTGCACCTGG----
NNTNCGCACCTGTNGAN
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGGTGCACCTGG--
AAGGKGRCGCAGGCA
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGGTGCACCTGG
---RYHYACCTGB
 A G T C C G T A T C A G A T C G A C G T A C T G T A G C G C T A A T G C G A T C C G A T A C T G A T C G
A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T