Information for 19-ATRGCTGTCACTA (Motif 36)

C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A
Reverse Opposite:
A G C T T C G A A C T G A C G T A C T G C G T A A T G C G C T A A T C G A T G C G A C T G T C A G A C T
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.737
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif54.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets66.5 +/- 21.9bp
Average Position of motif in Background55.0 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATRGCTGTCACTA--
NNNCAGCTGTCAATATN
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATRGCTGTCACTA-
AAGCACCTGTCAATAT
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ATRGCTGTCACTA
--VGCTGWCAVB-
 C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ATRGCTGTCACTA
---GCTGTCAA--
 C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATRGCTGTCACTA-
AACTAGCTGTCAATAC
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATRGCTGTCACTA
---CCTGTCAA--
 C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATRGCTGTCACTA-
AATTACCTGTCAATAC
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATRGCTGTCACTA-
AACGAGCTGTCAATAC
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ATRGCTGTCACTA-
--GSCTGTCACTCA
 C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATRGCTGTCACTA-
AAAGACCTGTCAATAC
 A C G T A C G T C T G A A C G T C T G A A T C G A T G C C A G T A T C G A C G T G T A C C G T A A G T C A C G T T C G A A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C