Information for 6-GAGCMKCSTGGTKAWM (Motif 11)

A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
Reverse Opposite:
A C G T C G A T C G A T G T A C C G T A A G T C A G T C C G T A A T C G C T A G G T C A A C G T A C T G A G T C C G A T A G T C
p-value:1e-11
log p-value:-2.614e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCMKCSTGGTKAWM
TGGGCGACGTCGTTAA-
 A C G T A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGCMKCSTGGTKAWM
--ACATCCTGNT----
 A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGCMKCSTGGTKAWM
------ACTAGTTAAC
 A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGCMKCSTGGTKAWM
-RGSMTBCTGGGAAAT
 A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGCMKCSTGGTKAWM--
---TACCCTAGTTACCGA
 A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAGCMKCSTGGTKAWM-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGCMKCSTGGTKAWM
CAATGCATTGTGGGTA--
 A C G T A C G T A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GAGCMKCSTGGTKAWM
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGCMKCSTGGTKAWM-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGCMKCSTGGTKAWM
CAGCC-----------
 A C T G C G T A A C T G A G T C G T C A A C G T A G T C A T G C A C G T A C T G A C T G A C G T A C T G C G T A C G T A G T C A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T