Information for 3-TCCAGTTAAGCAGGTT (Motif 6)

C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
Reverse Opposite:
T C G A G T C A T A G C G T A C C G A T T C A G T G A C G A C T A C G T C G T A C G T A A G T C G A C T C A T G C T A G G T C A
p-value:1e-17
log p-value:-3.939e+01
Information Content per bp:1.544
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif651.4
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets48.9 +/- 26.5bp
Average Position of motif in Background48.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGTTAAGCAGGTT-
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCAGTTAAGCAGGTT
-SCAGYCADGCATGAC
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TCCAGTTAAGCAGGTT-
--------AACAGGTGT
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCAGTTAAGCAGGTT
--CAGATAAGGN----
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCCAGTTAAGCAGGTT---
-------SDGCAGGTGCNS
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCCAGTTAAGCAGGTT
--NAGATAAGNN----
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCCAGTTAAGCAGGTT
-ANAGATAAGAA----
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCCAGTTAAGCAGGTT-
-GCAGCCAAGCGTGACN
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T A C G T
A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCCAGTTAAGCAGGTT
CTTAACCACTTAAGGAT---
 A C G T A C G T A C G T A C G T C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCCAGTTAAGCAGGTT
-NVAGATAAGR-----
 C A G T A G T C G T A C C T G A T C A G G C A T G C A T T G C A C T G A A C T G A G T C G C T A C A T G A T C G C A G T A G C T
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T