p-value: | 1e-3 |
log p-value: | -7.840e+00 |
Information Content per bp: | 1.934 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 9.7 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 50.2 +/- 24.7bp |
Average Position of motif in Background | 54.9 +/- 22.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACCATCA------- TCACCCATCAATAAACA |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTAACCATCA-- --GGCCATTAAC |
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PB0172.1_Sox1_2/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTAACCATCA--- NNNTAACAATTATAN |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTAACCATCA- GYCATCMATCAT |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACCATCA- -AAACMATTAN |
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Sox5/MA0087.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTAACCATCA -NAACAAT-- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACCATCA-- CCATCAATCAAA |
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Dux/MA0611.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTAACCATCA- ---CCAATCAA |
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FOXD1/MA0031.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACCATCA GTAAACAT-- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTAACCATCA NNACTTACCTN-- |
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