Information for 25-VACTAAGCACATN (Motif 38)

T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
Reverse Opposite:
A G C T T G C A C A G T A T C G C G A T A T C G A G T C G A C T A C G T C G T A A C T G C A G T A C T G
p-value:1e-6
log p-value:-1.440e+01
Information Content per bp:1.413
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 23.3bp
Average Position of motif in Background58.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFK/MA0496.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--VACTAAGCACATN
CTGAGTCAGCAATTT
 A C G T A C G T T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:VACTAAGCACATN-----
--CGAAGCACACAAAATA
 T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:VACTAAGCACATN
--NAAACCACAG-
 T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:VACTAAGCACATN
---AAACCACAGC
 T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--VACTAAGCACATN
ATGACTCAGCANWWT
 A C G T A C G T T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:VACTAAGCACATN
--GTCAGCANNTN
 T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----VACTAAGCACATN
AGGATGACTCAGCAC---
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---VACTAAGCACATN--
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:VACTAAGCACATN-
--NWAACCACADNN
 T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MAF::NFE2/MA0501.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--VACTAAGCACATN
ATGACTCAGCAATTT
 A C G T A C G T T G A C G T C A T G A C G C A T T G C A C T G A T C A G T A G C G C T A T A G C G T C A A C G T T C G A
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T