Information for 22-CTTACTAGTTTACAAT (Motif 30)

A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
Reverse Opposite:
C G T A A C G T A C G T T A C G A G C T C G T A C T G A C G T A G T A C G A C T C G T A A C T G C G A T T C G A C G T A C T A G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.6 +/- 22.2bp
Average Position of motif in Background43.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTTACTAGTTTACAAT
-------GTAAACAAT
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT
----CBTGTTTAYAWW
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT
---------NAACAAT
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTTACTAGTTTACAAT------
-----TAGTGAACAATAGATTT
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT
----------AACAAT
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT-------
------NNTNNACAATGGGANNN
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT--
-NNNTTTGTTTACATTTN
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T A C G T A C G T
A C G T T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT--
---ATTTGCATACAATGG
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTACTAGTTTACAAT
GANGTTAACTAGTTTNN---
 A C G T A C G T A C G T A C G T A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTTACTAGTTTACAAT----
----NNTNANAACAATTNNA
 A G T C C G A T A G C T G C T A A G T C C G A T C G T A A C T G G A C T G A C T C G A T C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A