Information for 3-GGTCAGGTCA (Motif 3)

C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A
Reverse Opposite:
A G C T T C A G T C G A A G T C G A T C G C A T T A C G G T C A G T A C G T A C
p-value:1e-27
log p-value:-6.251e+01
Information Content per bp:1.651
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif19.21%
Number of Background Sequences with motif3174.3
Percentage of Background Sequences with motif6.83%
Average Position of motif in Targets55.5 +/- 23.6bp
Average Position of motif in Background50.4 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GGTCAGGTCA
--TRAGGTCA
 C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GGTCAGGTCA
----AGGTCA
 C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTCAGGTCA-
---AAGGTCAC
 C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGTCA-
CGGTGACGTCAC
 A C G T C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGTCAGGTCA
--AGRGGTCA
 C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGTCA
CCGGTCACGTGA
 A C G T A C G T C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGTCA--
AATGCCACGTCATC
 A C G T A C G T C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGTCA----
CGCGCCGGGTCACGTA
 A C G T A C G T C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGTCAGGTCA--
---CAGGTGAGG
 C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTCAGGTCA-
NGATGACGTCAT
 A C G T C A T G C A T G C A G T A T G C C G T A C T A G T C A G A C G T A G T C T C G A A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T