Information for 16-GWCAGGYTGAAGTGCA (Motif 23)

A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
Reverse Opposite:
A C G T A C T G A G T C G T C A T A G C A G C T C A G T G A T C C G T A T C G A A T G C A T G C C A G T A C T G C G A T G T A C
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.694
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.6 +/- 20.5bp
Average Position of motif in Background66.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA
------NTCAAGTGG-
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA
------NTCAAGTGGN
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GWCAGGYTGAAGTGCA
------BTBRAGTGSN
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA
------CTYRAGTGSY
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA
-------TTAAGTGC-
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA---
--NNNANTGCAGTGCNNTT
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA---
---AAATTCAAGTGGNTTN
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GWCAGGYTGAAGTGCA
CGTCACGCATGACTGCA
 A C G T A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GWCAGGYTGAAGTGCA-
-------TTRAGTGSYK
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GWCAGGYTGAAGTGCA---
---AANTTCAAGTGGCTTN
 A C T G C G T A T G A C G C T A A T C G A T C G A G C T C G A T C T A G G T C A C T G A A T C G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A