Information for 8-CRAGAGAWCG (Motif 17)

A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A C G T A G T C A C G T A G T C A C G T A G C T A C T G
p-value:1e-11
log p-value:-2.660e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 28.4bp
Average Position of motif in Background58.9 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CRAGAGAWCG
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CRAGAGAWCG----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CRAGAGAWCG
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CRAGAGAWCG--
TATCATTAGAACGCT
 A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CRAGAGAWCG
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CRAGAGAWCG
GGNTCTCGCGAGAAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CRAGAGAWCG-
GAAAGTGAAAGT
 A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CRAGAGAWCG
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CRAGAGAWCG
--AGATAASR
 A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CRAGAGAWCG
TCTCGCGAGAAT-
 A C G T A C G T A C G T A G T C C T G A C G T A A C T G C G T A A C T G C G T A C G A T A G T C C T A G
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T