Information for 7-GCAATCTGCAATCAGA (Motif 12)

C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
Reverse Opposite:
C G A T G T A C C G A T A C T G C G T A G C A T A C G T A T C G A G T C C G T A A C T G G C T A A C G T G A C T A T C G A G T C
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.673
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 15.8bp
Average Position of motif in Background59.4 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA
-------CCAATCAA-
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCTGCAATCAGA
TGGACCAATCAGCACTCT--
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA
----CCATCAATCAAA
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA---
--AAGGCGAAATCATCGCA
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA-
-------CAAATCACTG
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GCAATCTGCAATCAGA
NNNVCTGWGYAAACASN
 A C G T C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA
AAATGGACCAATCAG-
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.47
Offset:4
Orientation:forward strand
Alignment:GCAATCTGCAATCAGA
----TCATCAATCA--
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GCAATCTGCAATCAGA
CTGAGTCAGCAATTT--
 A C G T C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GCAATCTGCAATCAGA
SSAATCCACANN----
 C T A G A T G C C G T A G T C A C G A T T A G C C G A T A C T G T A G C G T C A C G T A G C A T T G A C C G T A A C T G G C T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T