Information for 13-CATGCACACCACA (Motif 15)

A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T A G C G A T A C T G A C G T A C T G A G T C C G T A A C G T A C T G
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 35.4bp
Average Position of motif in Background45.4 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CATGCACACCACA---
----NWAACCACADNN
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CATGCACACCACA-
----NAAACCACAG
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATGCACACCACA--
CGAAGCACACAAAATA
 A C G T A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CATGCACACCACA--
-----AAACCACAGC
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CATGCACACCACA---
-----AAACCACAGAN
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CATGCACACCACA--
-----AAACCACANN
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATGCACACCACA
CNGTCACGCCAC-
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATGCACACCACA-
TTTGCACACGGCAC
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATGCACACCACA-
NNTTTGCACACGGCCC
 A C G T A C G T A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATGCACACCACA
-ATGCCCACC---
 A G T C C G T A A C G T C T A G A G T C C G T A A G T C C G T A A G T C A G T C G T C A A G T C C G T A
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T