Information for 17-ACAACATGAGCAGAGV (Motif 30)

C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
Reverse Opposite:
A G T C A G T C C A G T A G T C C G A T A C T G A T G C A C G T A G T C C G T A A C G T A C T G A G C T A C G T A C T G A C G T
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.829
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 31.8bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAACATGAGCAGAGV
GRACAGWMTGTYCTB---
 A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAACATGAGCAGAGV
GAGCACAGCAGGACA-----
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAACATGAGCAGAGV
GVACAGNMTGTYCTB---
 A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACAACATGAGCAGAGV
----CATGAC------
 C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACAACATGAGCAGAGV
AGNACANNNTGTNCTN---
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAACATGAGCAGAGV
CCACACAGCAGGAGA-----
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACAACATGAGCAGAGV
AGNACAGNCTGTTCTN---
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAACATGAGCAGAGV
CCACACAGCAGGAGA-----
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACAACATGAGCAGAGV
GAACADWATGTTCTT---
 A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----ACAACATGAGCAGAGV
ATGTCACAACAACAC------
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A T G A C C G T A A C G T A C T G C G T A A T C G A G T C C G T A A C T G G T C A C T A G T A C G
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T