Information for 14-TATTAGMCRCTGAAAT (Motif 22)

C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T G C A T A C G T G A T C C G T A A T C G A G C T A C T G A C G T G A T C C G A T G T C A C T G A A C G T G C T A
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.726
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.6 +/- 21.4bp
Average Position of motif in Background49.5 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TATTAGMCRCTGAAAT
CCGTATTATAAACAA----
 A C G T A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TATTAGMCRCTGAAAT
NCGTATTATAATCNTA---
 A C G T A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TATTAGMCRCTGAAAT--
--------ACTGAAACCA
 C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TATTAGMCRCTGAAAT
ACTAATTAGC---------
 A C G T A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TATTAGMCRCTGAAAT
NCAATTAN----------
 A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TATTAGMCRCTGAAAT-
-----GAAACTGAAACT
 C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

LHX9/MA0701.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TATTAGMCRCTGAAAT
CCAATTAA----------
 A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
A G T C G A T C G T C A C G T A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TATTAGMCRCTGAAAT
ACTAATTAAA---------
 A C G T A C G T A C G T C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TATTAGMCRCTGAAAT-
-----GAAAGTGAAAGT
 C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TATTAGMCRCTGAAAT--
-CTTAACCACTTAAGGAT
 C G A T C G T A A G C T A C G T C G T A C A T G T G C A G T A C C T G A A T G C C G A T C A T G C G T A C G T A C G T A A G C T A C G T A C G T
A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T