Information for 19-GTGCTAGCAA (Motif 41)

A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.583e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 31.5bp
Average Position of motif in Background29.0 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGCTAGCAA-
CTTCTGGGAAA
 A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGCTAGCAA---
-SCCTAGCAACAG
 A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGCTAGCAA----
CCGCATAGCAACGGA
 A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGCTAGCAA--
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGCTAGCAA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTGCTAGCAA----
TACCATAGCAACGGT
 A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTAGCAA-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGCTAGCAA----
ACATGCTACCTAATAC
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGCTAGCAA-
TTTCCAGGAAA
 A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGCTAGCAA----
ACTTGCTACCTACACC
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C