Information for 1-TCTCCGAGAA (Motif 4)

G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A
Reverse Opposite:
G A C T A G C T A T G C A G C T A T G C T A C G A T C G C T G A T C A G C G T A
p-value:1e-15
log p-value:-3.513e+01
Information Content per bp:1.686
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.42%
Number of Background Sequences with motif979.8
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets50.7 +/- 23.0bp
Average Position of motif in Background50.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCTCCGAGAA
ATTTCCAAGAA
 A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCGAGAA----
GNNACCGAGAATNNN
 A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCTCCGAGAA-
NTTTCTNAGAAA
 A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTCCGAGAA-
TTTCCTGGAAA
 G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTCCGAGAA----
TTGACCGAGAATTCC
 A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTCCGAGAA-
TTTCCCAGAAN
 G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTCCGAGAA--
NATTTCCNGGAAAT
 A C G T A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCTCCGAGAA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTCCGAGAA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTCCGAGAA-
NTTTCCNGGAAA
 A C G T G C A T A G T C G A C T A T G C A T G C T A C G T C G A T A C G T C G A C T G A A C G T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A