Motif 2

Information for 2-ACCCGCGGCCAGG (Motif 2)

Reverse Opposite:

p-value:	1e-15
log p-value:	-3.613e+01
Information Content per bp:	1.903
Number of Target Sequences with motif	7.0
Percentage of Target Sequences with motif	0.82%
Number of Background Sequences with motif	1.6
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	42.9 +/- 29.2bp
Average Position of motif in Background	32.6 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)	-0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:	1
Score:	0.60
Offset:	-2
Orientation:	forward strand
Alignment:	--ACCCGCGGCCAGG TCACCTCTGGGCAG-

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:	2
Score:	0.59
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCGCGGCCAGG TGCCCCCGGGCA--

GLIS2/MA0736.1/Jaspar

Match Rank:	3
Score:	0.57
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCGCGGCCAGG GACCCCCCGCGAAG

TFAP2B/MA0811.1/Jaspar

Match Rank:	4
Score:	0.57
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCGCGGCCAGG TGCCCCAGGGCA--

GCM2/MA0767.1/Jaspar

Match Rank:	5
Score:	0.56
Offset:	-1
Orientation:	reverse strand
Alignment:	-ACCCGCGGCCAGG TACCCGCATN----

PB0024.1_Gcm1_1/Jaspar

Match Rank:	6
Score:	0.56
Offset:	-4
Orientation:	forward strand
Alignment:	----ACCCGCGGCCAGG TCGTACCCGCATCATT-

TFAP2C/MA0524.2/Jaspar

Match Rank:	7
Score:	0.56
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCGCGGCCAGG TGCCCCAGGGCA--

Zfx/MA0146.2/Jaspar

Match Rank:	8
Score:	0.54
Offset:	-2
Orientation:	forward strand
Alignment:	--ACCCGCGGCCAGG GGGGCCGAGGCCTG-

INSM1/MA0155.1/Jaspar

Match Rank:	9
Score:	0.54
Offset:	-1
Orientation:	reverse strand
Alignment:	-ACCCGCGGCCAGG CGCCCCCTGACA--

GCM1/MA0646.1/Jaspar

Match Rank:	10
Score:	0.53
Offset:	-2
Orientation:	reverse strand
Alignment:	--ACCCGCGGCCAGG GTACCCGCATN----