Information for 12-CVSAGCGCCT (Motif 25)

G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G T C A G G A T C C A T G A G T C A C G T A T G C A G C T C T A G
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.620
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.68%
Number of Background Sequences with motif1524.6
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets44.2 +/- 27.5bp
Average Position of motif in Background50.8 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CVSAGCGCCT
--CAGCC---
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CVSAGCGCCT---
---AACACCTGCT
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CVSAGCGCCT
CACAGN----
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CVSAGCGCCT----
--SNGCACCTGCHS
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CVSAGCGCCT---
---CGCACCTGCT
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CVSAGCGCCT---
---AGCAGCTGCT
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CVSAGCGCCT
CTTGAGTGGCT
 A C G T G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CVSAGCGCCT
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CVSAGCGCCT---
---AACATCTGGA
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CVSAGCGCCT--
--VBSYGTCTGG
 G A T C T C G A A T C G C G T A T C A G G T A C C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G