Information for 13-ARGTCTGTRRGSC (Motif 20)

C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C A G T C A G T C C G T A A G T C C G T A A C T G C G T A A G T C A G T C A G C T
p-value:1e-10
log p-value:-2.362e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.1 +/- 22.8bp
Average Position of motif in Background63.1 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ARGTCTGTRRGSC-
GTAGGTCACTGGGTCA
 A C G T A C G T C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ARGTCTGTRRGSC
VBSYGTCTGG-----
 A C G T A C G T C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARGTCTGTRRGSC
AGGTCTCTAACC-
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ARGTCTGTRRGSC
---GCTGTG----
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ARGTCTGTRRGSC
TWGTCTGV-----
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ARGTCTGTRRGSC
CTGTCTGG-----
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ARGTCTGTRRGSC--
AGGTCACCCTGACCT
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ARGTCTGTRRGSC
CAGGTAAGTAT---
 A C G T C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ARGTCTGTRRGSC
TAGGTGTGAAG---
 A C G T C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ARGTCTGTRRGSC---
------GTGGGCCCCA
 C T G A C T A G A C T G A C G T A G T C A C G T A C T G G A C T C T A G C T A G A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A