Information for 12-SWGCCTCSGGAYT (Motif 19)

A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A G T C A G T C A T G C A C T G C G T A A C T G A C T G A G T C C G T A A T C G
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 28.1bp
Average Position of motif in Background49.3 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SWGCCTCSGGAYT
-TGCCTGAGGCN-
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SWGCCTCSGGAYT
-NGCCTNAGGCN-
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:SWGCCTCSGGAYT---
GTACATCCGGATTTTT
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SWGCCTCSGGAYT
-NGCCTGAGGCN-
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-SWGCCTCSGGAYT-
NTNGCCTCAGGCNNN
 A C G T A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SWGCCTCSGGAYT
ANTCCCTNGGGAAT
 A C G T A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SWGCCTCSGGAYT-
--SCCTSAGGSCAW
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:SWGCCTCSGGAYT-
--GCCTCAGGGCAT
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-SWGCCTCSGGAYT-
ANTGCCTGAGGCAAN
 A C G T A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SWGCCTCSGGAYT
-TGCCCTNGGGCA
 A T G C C G A T A C T G A G T C A G T C A C G T A G T C A T C G A C T G A C T G G T C A A G C T A C G T
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A