Information for 11-HGGGAAACCCCAC (Motif 17)

G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
Reverse Opposite:
A C T G A G C T A T C G A C T G A C T G A C T G A G C T A C G T A G C T A G T C G T A C A T G C C A T G
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.808
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 27.4bp
Average Position of motif in Background44.2 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:HGGGAAACCCCAC
--GGAAANCCCC-
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:HGGGAAACCCCAC
-GGAAATCCCC--
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-HGGGAAACCCCAC
GGGGGAATCCCC--
 A C G T G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:HGGGAAACCCCAC
--GGAAATTCCC-
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:HGGGAAACCCCAC
-GGGAAATCCCCN
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-HGGGAAACCCCAC
AGGGGAATCCCCT-
 A C G T G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:HGGGAAACCCCAC
ACTGAAACCA---
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-HGGGAAACCCCAC
AGGGGAATCCCCT-
 A C G T G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-HGGGAAACCCCAC---
NNNNGGTACCCCCCANN
 A C G T G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:HGGGAAACCCCAC------
---CTATCCCCGCCCTATT
 G A T C A T C G A C T G A C T G C T G A C G T A C T G A A G T C A G T C A G T C A T G C C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T