Information for 1-CTGCGGAGAR (Motif 1)

A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
Reverse Opposite:
G A C T C G A T T A G C G C A T A T G C G T A C T C A G T A G C C G T A T C A G
p-value:1e-27
log p-value:-6.410e+01
Information Content per bp:1.536
Number of Target Sequences with motif403.0
Percentage of Target Sequences with motif48.38%
Number of Background Sequences with motif12745.5
Percentage of Background Sequences with motif30.07%
Average Position of motif in Targets50.6 +/- 24.3bp
Average Position of motif in Background50.5 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGCGGAGAR
---CGGAGC-
 A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGAGAR---
GCCGCGCAGTGCGT
 A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGCGGAGAR
TTGCGGTTT-
 A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGAGAR
ATTGCGCAAT-
 A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGAGAR
TTTGCGGTTT-
 A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCGGAGAR
---NGAAGC-
 A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGCGGAGAR-
ATTTTACGGAAAAT
 A C G T A C G T A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A A C G T
C T G A C G A T C G A T G C A T G A C T G T C A A T G C A T C G A C T G G C T A C G T A G C T A G C T A C A G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGGAGAR
GCGCATGCGCAG--
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCGGAGAR
RGKGGGCGGAGC-
 A C G T A C G T A C G T A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGCGGAGAR--
NCGCGGACGTTG
 A G T C G C A T A T C G A G T C A C T G T A C G C G T A A T C G G C T A C T G A A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G