Information for 5-DTGAGCCAAGTGGTAT (Motif 9)

C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
Reverse Opposite:
G T C A A C G T T C G A A G T C A G T C C G T A A T G C A C G T A C G T A C T G A T C G A G T C A C G T A G T C T G C A G A C T
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.830
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 16.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
----NTCAAGTGGN--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:DTGAGCCAAGTGGTAT
--AAGGCAAGTGT---
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
-----TTAAGTGGT--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
-----TTAAGTGGN--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:DTGAGCCAAGTGGTAT
---GACCACGTGGT--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:DTGAGCCAAGTGGTAT
-----TTRAGTGSYK-
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
------CACGTGGC--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:DTGAGCCAAGTGGTAT
---NNCCACGTGG---
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
----NTCAAGTGG---
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:DTGAGCCAAGTGGTAT
--NNACCACGTGGT--
 C T G A A C G T A C T G C G T A A C T G A T G C G T A C C G T A C G T A A T C G C G A T A C T G A C T G A G C T C G T A A C G T
A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T