Information for 4-CAGAGGAGCCTTM (Motif 5)

T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
Reverse Opposite:
A C G T T G C A C T G A A C T G C T A G A G T C A C G T A G T C A G T C G A C T A T G C A C G T A C T G
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 16.7bp
Average Position of motif in Background64.3 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGAGCCTTM--
NTNNNAGGAGTCTCNTN
 A C G T A C G T T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGAGGAGCCTTM
---CGGAGC----
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGAGGAGCCTTM
-TGGGGA------
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGAGCCTTM
ACAAAGGNBCCT--
 A C G T T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAGAGGAGCCTTM
---NGAAGC----
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGAGGAGCCTTM
-AGAGGAA-----
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGAGGAGCCTTM
CAGGTGAGG----
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAGGAGCCTTM-
-AGGGGAATCCCCT
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGAGGAGCCTTM
--GTGGAT-----
 T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGGAGCCTTM
GTCCCCAGGGGA------
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A A T C G C T G A A C T G C T A G C G T A A C T G G A T C A G T C A G C T A C G T G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T